Metadata-Version: 2.1
Name: surpyvor
Version: 0.5.0
Summary: Manipulate vcf files of structural variants using SURVIVOR
Home-page: https://github.com/wdecoster/surpyvor
Author: Wouter De Coster
Author-email: decosterwouter@gmail.com
License: MIT
Keywords: nanopore
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Requires-Python: >=3
Description-Content-Type: text/markdown
License-File: LICENSE

# surpyvor
A python wrapper around [SURVIVOR](https://github.com/fritzsedlazeck/SURVIVOR), with additional convenience functions.


## sub-commands:
    merge               merging vcf files of SVs
    highsens            get union of SV vcfs
    highconf            get intersection of SV vcfs
    prf                 calculate precision, recall and F-measure
    upset               Make upset plot for multiple SV vcf files

Each sub-command has its own help information, accessible by running `surpyvor <command> -h/--help`


