elastix::CUDAResampler< TElastix > Class Template Reference

#include <elxCUDAResampler.h>

Inheritance diagram for elastix::CUDAResampler< TElastix >:

Collaboration diagram for elastix::CUDAResampler< TElastix >:

Public Types
typedef Superclass2::ConfigurationPointer	ConfigurationPointer
typedef Superclass2::ConfigurationType	ConfigurationType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass2::ElastixPointer	ElastixPointer
typedef Superclass2::ElastixType	ElastixType
typedef Superclass1::IndexType	IndexType
typedef Superclass1::InputImagePointer	InputImagePointer
typedef Superclass1::InputImageRegionType	InputImageRegionType
typedef Superclass1::InputImageType	InputImageType
typedef Superclass1::InterpolatorPointerType	InterpolatePointerType
typedef Superclass1::InterpolatorType	InterpolatorType
typedef Superclass2::ITKBaseType	ITKBaseType
typedef Superclass1::OriginPointType	OriginPointType
typedef Superclass1::OutputImagePointer	OutputImagePointer
typedef Superclass1::OutputImageRegionType	OutputImageRegionType
typedef Superclass1::OutputImageType	OutputImageType
typedef Superclass1::PixelType	PixelType
typedef SmartPointer< Self >	Pointer
typedef Superclass1::PointType	PointType
typedef Superclass2::RegistrationPointer	RegistrationPointer
typedef Superclass2::RegistrationType	RegistrationType
typedef CUDAResampler	Self
typedef Superclass1::SizeType	SizeType
typedef Superclass1::SpacingType	SpacingType
typedef itkCUDAResampleImageFilter < typename ResamplerBase < TElastix >::InputImageType, typename ResamplerBase < TElastix >::OutputImageType, typename ResamplerBase < TElastix >::CoordRepType >	Superclass1
typedef ResamplerBase< TElastix >	Superclass2
typedef Superclass1::TransformPointerType	TransformPointerType
typedef Superclass1::TransformType	TransformType
typedef Superclass1::ValidTransformPointer	ValidTransformPointer
Public Types inherited from itk::itkCUDAResampleImageFilter< ResamplerBase< TElastix >::InputImageType, ResamplerBase< TElastix >::OutputImageType, ResamplerBase< TElastix >::CoordRepType >
typedef SmartPointer< const Self >	ConstPointer
typedef cuda::CUDAResampleImageFilter < typename InternalBSplineTransformType::ParametersValueType, typename ResamplerBase < TElastix > ::InputImageType::PixelType, float >	CudaResampleImageFilterType
typedef Superclass::DirectionType	DirectionType
typedef Superclass::ImageBaseType	ImageBaseType
typedef Superclass::IndexType	IndexType
typedef Superclass::InputImageConstPointer	InputImageConstPointer
typedef Superclass::InputImagePointer	InputImagePointer
typedef Superclass::InputImageRegionType	InputImageRegionType
typedef Superclass::InputImageType	InputImageType
typedef Superclass::InputPixelType	InputPixelType
typedef AdvancedBSplineDeformableTransform < ResamplerBase< TElastix > ::CoordRepType, 3, 3 >	InternalAdvancedBSplineTransformType
typedef BSplineDeformableTransform < ResamplerBase< TElastix > ::CoordRepType, 3, 3 >	InternalBSplineTransformType
typedef AdvancedCombinationTransform < ResamplerBase< TElastix > ::CoordRepType, 3 >	InternalComboTransformType
typedef Superclass::InterpolatorPointerType	InterpolatorPointerType
typedef Superclass::InterpolatorType	InterpolatorType
typedef Superclass::OriginPointType	OriginPointType
typedef Superclass::OutputImagePointer	OutputImagePointer
typedef Superclass::OutputImageRegionType	OutputImageRegionType
typedef Superclass::OutputImageType	OutputImageType
typedef Superclass::PixelType	PixelType
typedef SmartPointer< Self >	Pointer
typedef Superclass::PointType	PointType
typedef itkCUDAResampleImageFilter	Self
typedef Superclass::SizeType	SizeType
typedef Superclass::SpacingType	SpacingType
typedef ResampleImageFilter < ResamplerBase< TElastix > ::InputImageType, ResamplerBase< TElastix > ::OutputImageType, ResamplerBase< TElastix > ::CoordRepType >	Superclass
typedef Superclass::TransformPointerType	TransformPointerType
typedef Superclass::TransformType	TransformType
typedef InternalAdvancedBSplineTransformType::ConstPointer	ValidTransformConstPointer
typedef InternalAdvancedBSplineTransformType::Pointer	ValidTransformPointer
Public Types inherited from elastix::ResamplerBase< TElastix >
typedef Superclass::ConfigurationPointer	ConfigurationPointer
typedef Superclass::ConfigurationType	ConfigurationType
typedef ElastixType::CoordRepType	CoordRepType
typedef ITKBaseType::DirectionType	DirectionType
typedef Superclass::ElastixPointer	ElastixPointer
typedef Superclass::ElastixType	ElastixType
typedef ITKBaseType::IndexType	IndexType
typedef ElastixType::MovingImageType	InputImageType
typedef ITKBaseType::InterpolatorType	InterpolatorType
typedef ResampleImageFilter < InputImageType, OutputImageType, CoordRepType >	ITKBaseType
typedef ITKBaseType::OriginPointType	OriginPointType
typedef ElastixType::MovingImageType	OutputImageType
typedef ITKBaseType::PixelType	OutputPixelType
typedef elx::ProgressCommand	ProgressCommandType
typedef Superclass::RegistrationPointer	RegistrationPointer
typedef Superclass::RegistrationType	RegistrationType
typedef ResamplerBase	Self
typedef ITKBaseType::SizeType	SizeType
typedef ITKBaseType::SpacingType	SpacingType
typedef BaseComponentSE< TElastix >	Superclass
typedef ITKBaseType::TransformType	TransformType
Public Types inherited from elastix::BaseComponentSE< TElastix >
typedef ElastixType::ConfigurationPointer	ConfigurationPointer
typedef ElastixType::ConfigurationType	ConfigurationType
typedef ElastixType::Pointer	ElastixPointer
typedef TElastix	ElastixType
typedef RegistrationType *	RegistrationPointer
typedef ElastixType::RegistrationBaseType	RegistrationType
typedef BaseComponentSE	Self
typedef BaseComponent	Superclass

Public Member Functions
virtual int	BeforeAll (void)
virtual void	BeforeRegistration (void)
	elxClassNameMacro ("CUDAResampler")
virtual const char *	GetClassName () const
virtual void	ReadFromFile (void)
virtual void	WriteToFile (void) const
Public Member Functions inherited from itk::itkCUDAResampleImageFilter< ResamplerBase< TElastix >::InputImageType, ResamplerBase< TElastix >::OutputImageType, ResamplerBase< TElastix >::CoordRepType >
virtual void	GenerateData (void)
virtual bool	GetUseCuda () const
virtual bool	GetUseFastCUDAKernel () const
virtual bool	GetUseGPUToCastData () const
virtual const WarningReportType &	GetWarningReport (void) const
virtual void	SetUseCuda (bool _arg)
virtual void	SetUseFastCUDAKernel (bool _arg)
virtual void	SetUseGPUToCastData (bool _arg)
virtual void	UseCudaOff ()
virtual void	UseCudaOn ()
virtual void	UseFastCUDAKernelOff ()
virtual void	UseFastCUDAKernelOn ()
virtual void	UseGPUToCastDataOff ()
virtual void	UseGPUToCastDataOn ()
Public Member Functions inherited from elastix::ResamplerBase< TElastix >
virtual void	AfterEachResolutionBase (void)
virtual void	AfterRegistrationBase (void)
virtual int	BeforeAllTransformix (void)
virtual void	BeforeRegistrationBase (void)
virtual ITKBaseType *	GetAsITKBaseType (void)
virtual const ITKBaseType *	GetAsITKBaseType (void) const
	itkStaticConstMacro (ImageDimension, unsigned int, OutputImageType::ImageDimension)
virtual void	WriteResultImage (const char *filename)
Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
virtual ConfigurationType *	GetConfiguration (void) const
virtual ElastixType *	GetElastix (void) const
virtual RegistrationPointer	GetRegistration (void) const
virtual void	SetConfiguration (ConfigurationType *_arg)
virtual void	SetElastix (ElastixType *_arg)
Public Member Functions inherited from elastix::BaseComponent
virtual void	AfterEachIteration (void)
virtual void	AfterEachIterationBase (void)
virtual void	AfterEachResolution (void)
virtual void	AfterRegistration (void)
virtual int	BeforeAllBase (void)
virtual void	BeforeEachResolution (void)
virtual void	BeforeEachResolutionBase (void)
virtual const char *	elxGetClassName (void) const
virtual const char *	GetComponentLabel (void) const
virtual void	SetComponentLabel (const char *label, unsigned int idx)

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::itkCUDAResampleImageFilter< ResamplerBase< TElastix >::InputImageType, ResamplerBase< TElastix >::OutputImageType, ResamplerBase< TElastix >::CoordRepType >
static Pointer	New ()

Protected Member Functions
virtual void	CheckForValidConfiguration (ValidTransformPointer &bSplineTransform)
	CUDAResampler ()
virtual	~CUDAResampler ()
Protected Member Functions inherited from itk::itkCUDAResampleImageFilter< ResamplerBase< TElastix >::InputImageType, ResamplerBase< TElastix >::OutputImageType, ResamplerBase< TElastix >::CoordRepType >
	itkCUDAResampleImageFilter ()
	~itkCUDAResampleImageFilter ()
Protected Member Functions inherited from elastix::ResamplerBase< TElastix >
	ResamplerBase ()
virtual void	SetComponents (void)
virtual	~ResamplerBase ()
Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
	BaseComponentSE ()
virtual	~BaseComponentSE ()
Protected Member Functions inherited from elastix::BaseComponent
	BaseComponent ()
virtual	~BaseComponent ()

Private Member Functions
	CUDAResampler (const Self &)
void	operator= (const Self &)

Additional Inherited Members
Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
ConfigurationPointer	m_Configuration
ElastixPointer	m_Elastix
RegistrationPointer	m_Registration

Detailed Description

template<class TElastix>
class elastix::CUDAResampler< TElastix >

A resampler based on the itk::CUDAResampleImageFilter.

Warning

The implementation is currently very limited: only a single third order B-spline transform is supported for 3D images together with third order B-spline interpolation.

The parameters used in this class are:

Parameters:

Resampler: Select this resampler as follows:
(Resampler "CUDAResampler")

Definition at line 41 of file elxCUDAResampler.h.

Member Typedef Documentation

template<class TElastix >

typedef Superclass2::ConfigurationPointer elastix::CUDAResampler< TElastix >::ConfigurationPointer

Definition at line 95 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass2::ConfigurationType elastix::CUDAResampler< TElastix >::ConfigurationType

Definition at line 94 of file elxCUDAResampler.h.

template<class TElastix >

typedef SmartPointer<const Self> elastix::CUDAResampler< TElastix >::ConstPointer

Definition at line 58 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass2::ElastixPointer elastix::CUDAResampler< TElastix >::ElastixPointer

Definition at line 93 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass2::ElastixType elastix::CUDAResampler< TElastix >::ElastixType

Typedef's from the ResamplerBase.

Definition at line 92 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::IndexType elastix::CUDAResampler< TElastix >::IndexType

Definition at line 83 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::InputImagePointer elastix::CUDAResampler< TElastix >::InputImagePointer

Definition at line 75 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::InputImageRegionType elastix::CUDAResampler< TElastix >::InputImageRegionType

Definition at line 77 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::InputImageType elastix::CUDAResampler< TElastix >::InputImageType

Typedef's inherited from the superclass.

Definition at line 73 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::InterpolatorPointerType elastix::CUDAResampler< TElastix >::InterpolatePointerType

Definition at line 81 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::InterpolatorType elastix::CUDAResampler< TElastix >::InterpolatorType

Definition at line 80 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass2::ITKBaseType elastix::CUDAResampler< TElastix >::ITKBaseType

Definition at line 98 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::OriginPointType elastix::CUDAResampler< TElastix >::OriginPointType

Definition at line 88 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::OutputImagePointer elastix::CUDAResampler< TElastix >::OutputImagePointer

Definition at line 76 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::OutputImageRegionType elastix::CUDAResampler< TElastix >::OutputImageRegionType

Definition at line 86 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::OutputImageType elastix::CUDAResampler< TElastix >::OutputImageType

Definition at line 74 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::PixelType elastix::CUDAResampler< TElastix >::PixelType

Definition at line 85 of file elxCUDAResampler.h.

template<class TElastix >

typedef SmartPointer<Self> elastix::CUDAResampler< TElastix >::Pointer

Definition at line 57 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::PointType elastix::CUDAResampler< TElastix >::PointType

Definition at line 84 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass2::RegistrationPointer elastix::CUDAResampler< TElastix >::RegistrationPointer

Definition at line 97 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass2::RegistrationType elastix::CUDAResampler< TElastix >::RegistrationType

Definition at line 96 of file elxCUDAResampler.h.

template<class TElastix >

typedef CUDAResampler elastix::CUDAResampler< TElastix >::Self

Standard ITK-stuff.

Definition at line 51 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::SizeType elastix::CUDAResampler< TElastix >::SizeType

Definition at line 82 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::SpacingType elastix::CUDAResampler< TElastix >::SpacingType

Definition at line 87 of file elxCUDAResampler.h.

template<class TElastix >

typedef itkCUDAResampleImageFilter< typename ResamplerBase<TElastix>::InputImageType, typename ResamplerBase<TElastix>::OutputImageType, typename ResamplerBase<TElastix>::CoordRepType > elastix::CUDAResampler< TElastix >::Superclass1

Definition at line 55 of file elxCUDAResampler.h.

template<class TElastix >

typedef ResamplerBase<TElastix> elastix::CUDAResampler< TElastix >::Superclass2

Definition at line 56 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::TransformPointerType elastix::CUDAResampler< TElastix >::TransformPointerType

Definition at line 79 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::TransformType elastix::CUDAResampler< TElastix >::TransformType

Definition at line 78 of file elxCUDAResampler.h.

template<class TElastix >

typedef Superclass1::ValidTransformPointer elastix::CUDAResampler< TElastix >::ValidTransformPointer

Definition at line 89 of file elxCUDAResampler.h.

Constructor & Destructor Documentation

template<class TElastix >

elastix::CUDAResampler< TElastix >::CUDAResampler ( )

inlineprotected

The constructor.

Definition at line 113 of file elxCUDAResampler.h.

template<class TElastix >

virtual elastix::CUDAResampler< TElastix >::~CUDAResampler ( )

inlineprotectedvirtual

The destructor.

Definition at line 115 of file elxCUDAResampler.h.

template<class TElastix >

elastix::CUDAResampler< TElastix >::CUDAResampler ( const Self &  )

private

The private constructor.

Member Function Documentation

template<class TElastix >

virtual int elastix::CUDAResampler< TElastix >::BeforeAll ( void  )

virtual

Reimplemented from elastix::BaseComponent.

template<class TElastix >

virtual void elastix::CUDAResampler< TElastix >::BeforeRegistration ( void  )

virtual

Reimplemented from elastix::BaseComponent.

template<class TElastix >

virtual void elastix::CUDAResampler< TElastix >::CheckForValidConfiguration ( ValidTransformPointer &  bSplineTransform )

protectedvirtual

Overwrite from itkCUDAResampleImageFilter. We simply call the Superclass and print the warning messages to elxout.

Reimplemented from itk::itkCUDAResampleImageFilter< ResamplerBase< TElastix >::InputImageType, ResamplerBase< TElastix >::OutputImageType, ResamplerBase< TElastix >::CoordRepType >.

template<class TElastix >

elastix::CUDAResampler< TElastix >::elxClassNameMacro

(

"CUDAResampler< TElastix >"

)

Name of this class. Use this name in the parameter file to select this specific resampler.
example: (Resampler "CUDAResampler")

template<class TElastix >

virtual const char* elastix::CUDAResampler< TElastix >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from elastix::ResamplerBase< TElastix >.

template<class TElastix >

static Pointer elastix::CUDAResampler< TElastix >::New ( )

static

Method for creation through the object factory.

template<class TElastix >

void elastix::CUDAResampler< TElastix >::operator= ( const Self &  )

private

The private copy constructor.

template<class TElastix >

virtual void elastix::CUDAResampler< TElastix >::ReadFromFile ( void  )

virtual

Function to read parameters from a file.

Reimplemented from elastix::ResamplerBase< TElastix >.

template<class TElastix >

virtual void elastix::CUDAResampler< TElastix >::WriteToFile ( void  ) const

virtual

Function to write parameters to a file.

Reimplemented from elastix::ResamplerBase< TElastix >.