|
typedef
Superclass2::ConfigurationPointer | ConfigurationPointer |
| |
typedef
Superclass2::ConfigurationType | ConfigurationType |
| |
| typedef SmartPointer< const Self > | ConstPointer |
| |
typedef
Superclass1::CoordinateRepresentationType | CoordinateRepresentationType |
| |
| typedef Superclass1::DerivativeType | DerivativeType |
| |
| typedef Superclass2::ElastixPointer | ElastixPointer |
| |
| typedef Superclass2::ElastixType | ElastixType |
| |
typedef
Superclass1::FixedImageConstPointer | FixedImageConstPointer |
| |
typedef
Superclass1::FixedImageLimiterOutputType | FixedImageLimiterOutputType |
| |
typedef
Superclass1::FixedImageLimiterType | FixedImageLimiterType |
| |
typedef
Superclass1::FixedImageMaskPointer | FixedImageMaskPointer |
| |
typedef
Superclass1::FixedImageMaskType | FixedImageMaskType |
| |
typedef
Superclass1::FixedImagePixelType | FixedImagePixelType |
| |
typedef
Superclass1::FixedImageRegionType | FixedImageRegionType |
| |
| typedef Superclass1::FixedImageType | FixedImageType |
| |
typedef
Superclass1::GradientImageFilterPointer | GradientImageFilterPointer |
| |
typedef
Superclass1::GradientImageFilterType | GradientImageFilterType |
| |
typedef
Superclass1::GradientImagePointer | GradientImagePointer |
| |
typedef
Superclass1::GradientImageType | GradientImageType |
| |
typedef
Superclass1::GradientPixelType | GradientPixelType |
| |
typedef
Superclass1::ImageSampleContainerPointer | ImageSampleContainerPointer |
| |
typedef
Superclass1::ImageSampleContainerType | ImageSampleContainerType |
| |
typedef
Superclass1::ImageSamplerPointer | ImageSamplerPointer |
| |
typedef
Superclass1::ImageSamplerType | ImageSamplerType |
| |
| typedef Superclass1::InputPointType | InputPointType |
| |
typedef
Superclass1::InterpolatorPointer | InterpolatorPointer |
| |
typedef
Superclass1::InterpolatorType | InterpolatorType |
| |
| typedef Superclass2::ITKBaseType | ITKBaseType |
| |
| typedef Superclass1::MeasureType | MeasureType |
| |
typedef
Superclass1::MovingImageConstPointer | MovingImageConstPointer |
| |
typedef
Superclass1::MovingImageDerivativeScalesType | MovingImageDerivativeScalesType |
| |
typedef
Superclass1::MovingImageLimiterOutputType | MovingImageLimiterOutputType |
| |
typedef
Superclass1::MovingImageLimiterType | MovingImageLimiterType |
| |
typedef
Superclass1::MovingImageMaskPointer | MovingImageMaskPointer |
| |
typedef
Superclass1::MovingImageMaskType | MovingImageMaskType |
| |
typedef
Superclass1::MovingImagePixelType | MovingImagePixelType |
| |
typedef
Superclass1::MovingImageRegionType | MovingImageRegionType |
| |
typedef
Superclass1::MovingImageType | MovingImageType |
| |
typedef
Superclass1::OutputPointType | OutputPointType |
| |
| typedef Superclass1::ParametersType | ParametersType |
| |
| typedef SmartPointer< Self > | Pointer |
| |
| typedef Superclass1::RealType | RealType |
| |
typedef
Superclass2::RegistrationPointer | RegistrationPointer |
| |
typedef
Superclass2::RegistrationType | RegistrationType |
| |
typedef
NormalizedMutualInformationMetric | Self |
| |
typedef
ParzenWindowNormalizedMutualInformationImageToImageMetric
< typename MetricBase
< TElastix >::FixedImageType,
typename MetricBase< TElastix >
::MovingImageType > | Superclass1 |
| |
| typedef MetricBase< TElastix > | Superclass2 |
| |
| typedef TimerType::Pointer | TimerPointer |
| |
| typedef tmr::Timer | TimerType |
| |
typedef
Superclass1::TransformJacobianType | TransformJacobianType |
| |
typedef
Superclass1::TransformParametersType | TransformParametersType |
| |
typedef
Superclass1::TransformPointer | TransformPointer |
| |
| typedef Superclass1::TransformType | TransformType |
| |
| typedef SmartPointer< const Self > | ConstPointer |
| |
typedef
Superclass::CoordinateRepresentationType | CoordinateRepresentationType |
| |
| typedef Superclass::DerivativeType | DerivativeType |
| |
typedef
Superclass::FixedImageConstPointer | FixedImageConstPointer |
| |
typedef
Superclass::FixedImageLimiterOutputType | FixedImageLimiterOutputType |
| |
typedef
Superclass::FixedImageLimiterType | FixedImageLimiterType |
| |
typedef
Superclass::FixedImageMaskPointer | FixedImageMaskPointer |
| |
typedef
Superclass::FixedImageMaskType | FixedImageMaskType |
| |
typedef
Superclass::FixedImagePixelType | FixedImagePixelType |
| |
typedef
Superclass::FixedImageRegionType | FixedImageRegionType |
| |
| typedef Superclass::FixedImageType | FixedImageType |
| |
typedef
Superclass::GradientImageFilterPointer | GradientImageFilterPointer |
| |
typedef
Superclass::GradientImageFilterType | GradientImageFilterType |
| |
typedef
Superclass::GradientImagePointer | GradientImagePointer |
| |
typedef
Superclass::GradientImageType | GradientImageType |
| |
typedef
Superclass::GradientPixelType | GradientPixelType |
| |
typedef
Superclass::ImageSampleContainerPointer | ImageSampleContainerPointer |
| |
typedef
Superclass::ImageSampleContainerType | ImageSampleContainerType |
| |
typedef
Superclass::ImageSamplerPointer | ImageSamplerPointer |
| |
typedef
Superclass::ImageSamplerType | ImageSamplerType |
| |
| typedef Superclass::InputPointType | InputPointType |
| |
typedef
Superclass::InterpolatorPointer | InterpolatorPointer |
| |
typedef
Superclass::InterpolatorType | InterpolatorType |
| |
| typedef Superclass::MeasureType | MeasureType |
| |
typedef
Superclass::MovingImageConstPointer | MovingImageConstPointer |
| |
typedef
Superclass::MovingImageDerivativeScalesType | MovingImageDerivativeScalesType |
| |
typedef
Superclass::MovingImageLimiterOutputType | MovingImageLimiterOutputType |
| |
typedef
Superclass::MovingImageLimiterType | MovingImageLimiterType |
| |
typedef
Superclass::MovingImageMaskPointer | MovingImageMaskPointer |
| |
typedef
Superclass::MovingImageMaskType | MovingImageMaskType |
| |
typedef
Superclass::MovingImagePixelType | MovingImagePixelType |
| |
typedef
Superclass::MovingImageRegionType | MovingImageRegionType |
| |
| typedef Superclass::MovingImageType | MovingImageType |
| |
| typedef Superclass::OutputPointType | OutputPointType |
| |
| typedef Superclass::ParametersType | ParametersType |
| |
| typedef SmartPointer< Self > | Pointer |
| |
| typedef Superclass::RealType | RealType |
| |
typedef
ParzenWindowNormalizedMutualInformationImageToImageMetric | Self |
| |
typedef
ParzenWindowHistogramImageToImageMetric
< MetricBase< TElastix >
::FixedImageType, MetricBase
< TElastix >::MovingImageType > | Superclass |
| |
typedef
Superclass::TransformJacobianType | TransformJacobianType |
| |
typedef
Superclass::TransformParametersType | TransformParametersType |
| |
typedef
Superclass::TransformPointer | TransformPointer |
| |
| typedef Superclass::TransformType | TransformType |
| |
| typedef SmartPointer< const Self > | ConstPointer |
| |
typedef
Superclass::CoordinateRepresentationType | CoordinateRepresentationType |
| |
| typedef Superclass::DerivativeType | DerivativeType |
| |
typedef
Superclass::DerivativeValueType | DerivativeValueType |
| |
typedef
Superclass::FixedImageConstPointer | FixedImageConstPointer |
| |
typedef
Superclass::FixedImageLimiterOutputType | FixedImageLimiterOutputType |
| |
typedef
Superclass::FixedImageLimiterType | FixedImageLimiterType |
| |
typedef
Superclass::FixedImageMaskPointer | FixedImageMaskPointer |
| |
typedef
Superclass::FixedImageMaskType | FixedImageMaskType |
| |
typedef
Superclass::FixedImagePixelType | FixedImagePixelType |
| |
typedef
Superclass::FixedImageRegionType | FixedImageRegionType |
| |
| typedef Superclass::FixedImageType | FixedImageType |
| |
typedef
Superclass::GradientImageFilterPointer | GradientImageFilterPointer |
| |
typedef
Superclass::GradientImageFilterType | GradientImageFilterType |
| |
typedef
Superclass::GradientImagePointer | GradientImagePointer |
| |
typedef
Superclass::GradientImageType | GradientImageType |
| |
typedef
Superclass::GradientPixelType | GradientPixelType |
| |
typedef
Superclass::ImageSampleContainerPointer | ImageSampleContainerPointer |
| |
typedef
Superclass::ImageSampleContainerType | ImageSampleContainerType |
| |
typedef
Superclass::ImageSamplerPointer | ImageSamplerPointer |
| |
typedef
Superclass::ImageSamplerType | ImageSamplerType |
| |
| typedef Superclass::InputPointType | InputPointType |
| |
typedef
Superclass::InterpolatorPointer | InterpolatorPointer |
| |
typedef
Superclass::InterpolatorType | InterpolatorType |
| |
| typedef Superclass::MeasureType | MeasureType |
| |
typedef
Superclass::MovingImageConstPointer | MovingImageConstPointer |
| |
typedef
Superclass::MovingImageDerivativeScalesType | MovingImageDerivativeScalesType |
| |
typedef
Superclass::MovingImageLimiterOutputType | MovingImageLimiterOutputType |
| |
typedef
Superclass::MovingImageLimiterType | MovingImageLimiterType |
| |
typedef
Superclass::MovingImageMaskPointer | MovingImageMaskPointer |
| |
typedef
Superclass::MovingImageMaskType | MovingImageMaskType |
| |
typedef
Superclass::MovingImagePixelType | MovingImagePixelType |
| |
typedef
Superclass::MovingImageRegionType | MovingImageRegionType |
| |
| typedef Superclass::MovingImageType | MovingImageType |
| |
| typedef Superclass::OutputPointType | OutputPointType |
| |
| typedef Superclass::ParametersType | ParametersType |
| |
| typedef SmartPointer< Self > | Pointer |
| |
| typedef Superclass::RealType | RealType |
| |
typedef
ParzenWindowHistogramImageToImageMetric | Self |
| |
typedef
AdvancedImageToImageMetric
< MetricBase< TElastix >
::FixedImageType, MetricBase
< TElastix >::MovingImageType > | Superclass |
| |
typedef
Superclass::TransformJacobianType | TransformJacobianType |
| |
typedef
Superclass::TransformParametersType | TransformParametersType |
| |
typedef
Superclass::TransformPointer | TransformPointer |
| |
| typedef Superclass::TransformType | TransformType |
| |
typedef AdvancedTransform
< ScalarType,
FixedImageDimension,
MovingImageDimension > | AdvancedTransformType |
| |
| typedef SmartPointer< const Self > | ConstPointer |
| |
typedef
Superclass::CoordinateRepresentationType | CoordinateRepresentationType |
| |
| typedef Superclass::DerivativeType | DerivativeType |
| |
| typedef DerivativeType::ValueType | DerivativeValueType |
| |
typedef
Superclass::FixedImageConstPointer | FixedImageConstPointer |
| |
typedef
FixedImageLimiterType::OutputType | FixedImageLimiterOutputType |
| |
typedef LimiterFunctionBase
< RealType,
FixedImageDimension > | FixedImageLimiterType |
| |
typedef
Superclass::FixedImageMaskPointer | FixedImageMaskPointer |
| |
typedef
Superclass::FixedImageMaskType | FixedImageMaskType |
| |
| typedef FixedImageType::PixelType | FixedImagePixelType |
| |
| typedef FixedImageType::Pointer | FixedImagePointer |
| |
typedef
Superclass::FixedImageRegionType | FixedImageRegionType |
| |
| typedef Superclass::FixedImageType | FixedImageType |
| |
typedef
Superclass::GradientImageFilterPointer | GradientImageFilterPointer |
| |
typedef
Superclass::GradientImageFilterType | GradientImageFilterType |
| |
typedef
Superclass::GradientImagePointer | GradientImagePointer |
| |
typedef
Superclass::GradientImageType | GradientImageType |
| |
typedef
Superclass::GradientPixelType | GradientPixelType |
| |
typedef vnl_sparse_matrix
< HessianValueType > | HessianType |
| |
| typedef DerivativeType::ValueType | HessianValueType |
| |
typedef
ImageSamplerType::OutputVectorContainerPointer | ImageSampleContainerPointer |
| |
typedef
ImageSamplerType::OutputVectorContainerType | ImageSampleContainerType |
| |
| typedef ImageSamplerType::Pointer | ImageSamplerPointer |
| |
typedef ImageSamplerBase
< FixedImageType > | ImageSamplerType |
| |
| typedef Superclass::InputPointType | InputPointType |
| |
typedef
Superclass::InterpolatorPointer | InterpolatorPointer |
| |
typedef
Superclass::InterpolatorType | InterpolatorType |
| |
| typedef Superclass::MeasureType | MeasureType |
| |
typedef
Superclass::MovingImageConstPointer | MovingImageConstPointer |
| |
typedef FixedArray< double,
itkGetStaticConstMacro(MovingImageDimension) > | MovingImageDerivativeScalesType |
| |
typedef
MovingImageLimiterType::OutputType | MovingImageLimiterOutputType |
| |
typedef LimiterFunctionBase
< RealType,
MovingImageDimension > | MovingImageLimiterType |
| |
typedef
Superclass::MovingImageMaskPointer | MovingImageMaskPointer |
| |
typedef
Superclass::MovingImageMaskType | MovingImageMaskType |
| |
typedef
Superclass::MovingImagePixelType | MovingImagePixelType |
| |
| typedef MovingImageType::Pointer | MovingImagePointer |
| |
| typedef MovingImageType::RegionType | MovingImageRegionType |
| |
| typedef Superclass::MovingImageType | MovingImageType |
| |
| typedef Superclass::OutputPointType | OutputPointType |
| |
| typedef Superclass::ParametersType | ParametersType |
| |
| typedef SmartPointer< Self > | Pointer |
| |
| typedef Superclass::RealType | RealType |
| |
| typedef TransformType::ScalarType | ScalarType |
| |
| typedef AdvancedImageToImageMetric | Self |
| |
typedef ImageToImageMetric
< MetricBase< TElastix >
::FixedImageType, MetricBase
< TElastix >::MovingImageType > | Superclass |
| |
typedef
Superclass::TransformJacobianType | TransformJacobianType |
| |
typedef
Superclass::TransformParametersType | TransformParametersType |
| |
typedef
Superclass::TransformPointer | TransformPointer |
| |
| typedef Superclass::TransformType | TransformType |
| |
typedef
AdvancedImageToImageMetric
< FixedImageType,
MovingImageType > | AdvancedMetricType |
| |
typedef
Superclass::ConfigurationPointer | ConfigurationPointer |
| |
typedef
Superclass::ConfigurationType | ConfigurationType |
| |
typedef
ITKBaseType::ParametersValueType | CoordinateRepresentationType |
| |
| typedef Superclass::ElastixPointer | ElastixPointer |
| |
| typedef Superclass::ElastixType | ElastixType |
| |
| typedef ElastixType::FixedImageType | FixedImageType |
| |
typedef PointSet
< CoordinateRepresentationType,
FixedImageDimension,
DefaultStaticMeshTraits
< CoordinateRepresentationType,
FixedImageDimension,
FixedImageDimension,
CoordinateRepresentationType,
CoordinateRepresentationType,
CoordinateRepresentationType > > | FixedPointSetType |
| |
| typedef FixedImageType::PointType | FixedPointType |
| |
| typedef FixedPointType::ValueType | FixedPointValueType |
| |
typedef
AdvancedMetricType::ImageSamplerType | ImageSamplerBaseType |
| |
| typedef SingleValuedCostFunction | ITKBaseType |
| |
| typedef ITKBaseType::MeasureType | MeasureType |
| |
typedef
ElastixType::MovingImageType | MovingImageType |
| |
typedef PointSet
< CoordinateRepresentationType,
MovingImageDimension,
DefaultStaticMeshTraits
< CoordinateRepresentationType,
MovingImageDimension,
MovingImageDimension,
CoordinateRepresentationType,
CoordinateRepresentationType,
CoordinateRepresentationType > > | MovingPointSetType |
| |
| typedef MovingImageType::PointType | MovingPointType |
| |
| typedef MovingPointType::ValueType | MovingPointValueType |
| |
typedef
Superclass::RegistrationPointer | RegistrationPointer |
| |
typedef
Superclass::RegistrationType | RegistrationType |
| |
| typedef MetricBase | Self |
| |
| typedef BaseComponentSE< TElastix > | Superclass |
| |
typedef
ElastixType::ConfigurationPointer | ConfigurationPointer |
| |
typedef
ElastixType::ConfigurationType | ConfigurationType |
| |
| typedef ElastixType::Pointer | ElastixPointer |
| |
| typedef TElastix | ElastixType |
| |
| typedef RegistrationType * | RegistrationPointer |
| |
typedef
ElastixType::RegistrationBaseType | RegistrationType |
| |
| typedef BaseComponentSE | Self |
| |
| typedef BaseComponent | Superclass |
| |
|
| virtual void | BeforeEachResolution (void) |
| |
| | elxClassNameMacro ("NormalizedMutualInformation") |
| |
| virtual const char * | GetClassName () const |
| |
| virtual void | Initialize (void) throw (ExceptionObject) |
| |
| | itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension) |
| |
| | itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension) |
| |
| MeasureType | GetValue (const ParametersType ¶meters) const |
| |
| void | GetValueAndDerivative (const ParametersType ¶meters, MeasureType &Value, DerivativeType &Derivative) const |
| |
| | itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension) |
| |
| | itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension) |
| |
| void | GetDerivative (const ParametersType ¶meters, DerivativeType &Derivative) const |
| |
| virtual double | GetFiniteDifferencePerturbation () const |
| |
| virtual unsigned int | GetFixedKernelBSplineOrder () const |
| |
| virtual unsigned int | GetMovingKernelBSplineOrder () const |
| |
| virtual unsigned long | GetNumberOfFixedHistogramBins () |
| |
| virtual unsigned long | GetNumberOfMovingHistogramBins () |
| |
| virtual bool | GetUseDerivative () const |
| |
| virtual const bool & | GetUseExplicitPDFDerivatives () |
| |
| virtual bool | GetUseFiniteDifferenceDerivative () const |
| |
| void | GetValueAndDerivative (const ParametersType ¶meters, MeasureType &value, DerivativeType &derivative) const |
| |
| void | Initialize (void) throw ( ExceptionObject ) |
| |
| | itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension) |
| |
| | itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension) |
| |
| virtual void | SetFiniteDifferencePerturbation (double _arg) |
| |
| virtual void | SetFixedKernelBSplineOrder (unsigned int _arg) |
| |
| virtual void | SetMovingKernelBSplineOrder (unsigned int _arg) |
| |
| virtual void | SetNumberOfFixedHistogramBins (unsigned long _arg) |
| |
| virtual void | SetNumberOfMovingHistogramBins (unsigned long _arg) |
| |
| virtual void | SetUseDerivative (bool _arg) |
| |
| virtual void | SetUseExplicitPDFDerivatives (bool _arg) |
| |
| virtual void | SetUseFiniteDifferenceDerivative (bool _arg) |
| |
| virtual void | UseExplicitPDFDerivativesOff () |
| |
| virtual void | UseExplicitPDFDerivativesOn () |
| |
virtual const
FixedImageLimiterType * | GetFixedImageLimiter () |
| |
| virtual double | GetFixedLimitRangeRatio () const |
| |
| virtual ImageSamplerType * | GetImageSampler (void) const |
| |
virtual const
MovingImageDerivativeScalesType & | GetMovingImageDerivativeScales () |
| |
virtual const
MovingImageLimiterType * | GetMovingImageLimiter () |
| |
| virtual double | GetMovingLimitRangeRatio () const |
| |
| virtual double | GetRequiredRatioOfValidSamples () const |
| |
| virtual void | GetSelfHessian (const TransformParametersType ¶meters, HessianType &H) const |
| |
| const AdvancedTransformType * | GetTransform (void) const |
| |
| virtual bool | GetUseFixedImageLimiter () const |
| |
| virtual bool | GetUseImageSampler () const |
| |
| virtual bool | GetUseMovingImageDerivativeScales () const |
| |
| virtual bool | GetUseMovingImageLimiter () const |
| |
| | itkStaticConstMacro (MovingImageDimension, unsigned int, MetricBase< TElastix >::MovingImageType::ImageDimension) |
| |
| | itkStaticConstMacro (FixedImageDimension, unsigned int, MetricBase< TElastix >::FixedImageType::ImageDimension) |
| |
| virtual void | SetFixedImageLimiter (FixedImageLimiterType *_arg) |
| |
| virtual void | SetFixedLimitRangeRatio (double _arg) |
| |
| virtual void | SetImageSampler (ImageSamplerType *_arg) |
| |
| virtual void | SetMovingImageDerivativeScales (MovingImageDerivativeScalesType _arg) |
| |
| virtual void | SetMovingImageLimiter (MovingImageLimiterType *_arg) |
| |
| virtual void | SetMovingLimitRangeRatio (double _arg) |
| |
| virtual void | SetRequiredRatioOfValidSamples (double _arg) |
| |
| virtual void | SetTransform (AdvancedTransformType *arg) |
| |
| virtual void | SetUseMovingImageDerivativeScales (bool _arg) |
| |
| virtual void | AfterEachIterationBase (void) |
| |
| virtual void | BeforeEachResolutionBase (void) |
| |
| virtual ImageSamplerBaseType * | GetAdvancedMetricImageSampler (void) const |
| |
| virtual bool | GetAdvancedMetricUseImageSampler (void) const |
| |
| virtual ITKBaseType * | GetAsITKBaseType (void) |
| |
| virtual const ITKBaseType * | GetAsITKBaseType (void) const |
| |
| virtual MeasureType | GetCurrentExactMetricValue (void) const |
| |
| virtual bool | GetShowExactMetricValue (void) const |
| |
| | itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension) |
| |
| | itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension) |
| |
| virtual void | SelectNewSamples (void) |
| |
| virtual void | SetAdvancedMetricImageSampler (ImageSamplerBaseType *sampler) |
| |
| virtual ConfigurationType * | GetConfiguration (void) const |
| |
| virtual ElastixType * | GetElastix (void) const |
| |
| virtual RegistrationPointer | GetRegistration (void) const |
| |
| virtual void | SetConfiguration (ConfigurationType *_arg) |
| |
| virtual void | SetElastix (ElastixType *_arg) |
| |
| virtual void | AfterEachIteration (void) |
| |
| virtual void | AfterEachResolution (void) |
| |
| virtual void | AfterEachResolutionBase (void) |
| |
| virtual void | AfterRegistration (void) |
| |
| virtual void | AfterRegistrationBase (void) |
| |
| virtual int | BeforeAll (void) |
| |
| virtual int | BeforeAllBase (void) |
| |
| virtual void | BeforeRegistration (void) |
| |
| virtual void | BeforeRegistrationBase (void) |
| |
| virtual const char * | elxGetClassName (void) const |
| |
| virtual const char * | GetComponentLabel (void) const |
| |
| virtual void | SetComponentLabel (const char *label, unsigned int idx) |
| |
|
| | NormalizedMutualInformationMetric () |
| |
| virtual | ~NormalizedMutualInformationMetric () |
| |
| virtual void | ComputeLogMarginalPDF (MarginalPDFType &pdf) const |
| |
| virtual MeasureType | ComputeNormalizedMutualInformation (MeasureType &jointEntropy) const |
| |
| | ParzenWindowNormalizedMutualInformationImageToImageMetric () |
| |
| void | PrintSelf (std::ostream &os, Indent indent) const |
| |
| virtual | ~ParzenWindowNormalizedMutualInformationImageToImageMetric () |
| |
| virtual void | ComputeIncrementalMarginalPDFs (const JointPDFDerivativesType *incrementalPDF, IncrementalMarginalPDFType *fixedIncrementalMarginalPDF, IncrementalMarginalPDFType *movingIncrementalMarginalPDF) const |
| |
| virtual void | ComputeMarginalPDF (const JointPDFType *jointPDF, MarginalPDFType &marginalPDF, unsigned int direction) const |
| |
| virtual void | ComputePDFs (const ParametersType ¶meters) const |
| |
| virtual void | ComputePDFsAndIncrementalPDFs (const ParametersType ¶meters) const |
| |
| virtual void | ComputePDFsAndPDFDerivatives (const ParametersType ¶meters) const |
| |
| void | EvaluateParzenValues (double parzenWindowTerm, OffsetValueType parzenWindowIndex, const KernelFunctionType *kernel, ParzenValueContainerType &parzenValues) const |
| |
| void | EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const |
| |
| virtual void | GetValueAndAnalyticDerivative (const ParametersType &, MeasureType &, DerivativeType &) const |
| |
| virtual void | GetValueAndFiniteDifferenceDerivative (const ParametersType &, MeasureType &, DerivativeType &) const |
| |
| virtual void | InitializeHistograms (void) |
| |
| virtual void | InitializeKernels (void) |
| |
| virtual void | NormalizeJointPDF (JointPDFType *pdf, double factor) const |
| |
| virtual void | NormalizeJointPDFDerivatives (JointPDFDerivativesType *pdf, double factor) const |
| |
| | ParzenWindowHistogramImageToImageMetric () |
| |
| void | PrintSelf (std::ostream &os, Indent indent) const |
| |
| virtual void | UpdateJointPDFAndDerivatives (RealType fixedImageValue, RealType movingImageValue, const DerivativeType *imageJacobian, const NonZeroJacobianIndicesType *nzji) const |
| |
| virtual void | UpdateJointPDFAndIncrementalPDFs (RealType fixedImageValue, RealType movingImageValue, RealType movingMaskValue, const DerivativeType &movingImageValuesRight, const DerivativeType &movingImageValuesLeft, const DerivativeType &movingMaskValuesRight, const DerivativeType &movingMaskValuesLeft, const NonZeroJacobianIndicesType &nzji) const |
| |
| void | UpdateJointPDFDerivatives (const JointPDFIndexType &pdfIndex, double factor, const DerivativeType &imageJacobian, const NonZeroJacobianIndicesType &nzji) const |
| |
| virtual | ~ParzenWindowHistogramImageToImageMetric () |
| |
| | AdvancedImageToImageMetric () |
| |
| virtual void | CheckForAdvancedTransform (void) |
| |
| virtual void | CheckForBSplineInterpolator (void) |
| |
| virtual void | CheckNumberOfSamples (unsigned long wanted, unsigned long found) const |
| |
| virtual void | ComputeFixedImageExtrema (const FixedImageType *image, const FixedImageRegionType ®ion) |
| |
| virtual void | ComputeMovingImageExtrema (const MovingImageType *image, const MovingImageRegionType ®ion) |
| |
| virtual bool | EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const |
| |
| virtual bool | EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const |
| |
| virtual void | InitializeImageSampler (void) throw ( ExceptionObject ) |
| |
| virtual void | InitializeLimiters (void) |
| |
| virtual bool | IsInsideMovingMask (const MovingImagePointType &point) const |
| |
| void | PrintSelf (std::ostream &os, Indent indent) const |
| |
| virtual void | SetUseFixedImageLimiter (bool _arg) |
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| virtual void | SetUseImageSampler (bool _arg) |
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| virtual void | SetUseMovingImageLimiter (bool _arg) |
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| virtual bool | TransformPoint (const FixedImagePointType &fixedImagePoint, MovingImagePointType &mappedPoint) const |
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| virtual | ~AdvancedImageToImageMetric () |
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| virtual MeasureType | GetExactValue (const ParametersType ¶meters) |
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| | MetricBase () |
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| virtual | ~MetricBase () |
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| | BaseComponentSE () |
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| virtual | ~BaseComponentSE () |
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| | BaseComponent () |
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| virtual | ~BaseComponent () |
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|
typedef
Superclass::BSplineInterpolatorType | BSplineInterpolatorType |
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typedef
Superclass::CentralDifferenceGradientFilterType | CentralDifferenceGradientFilterType |
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typedef
Superclass::FixedImageIndexType | FixedImageIndexType |
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typedef
Superclass::FixedImageIndexValueType | FixedImageIndexValueType |
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typedef
Superclass::FixedImagePointType | FixedImagePointType |
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typedef
Superclass::IncrementalMarginalPDFType | IncrementalMarginalPDFType |
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typedef
Superclass::JointPDFDerivativesIndexType | JointPDFDerivativesIndexType |
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typedef
Superclass::JointPDFDerivativesRegionType | JointPDFDerivativesRegionType |
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typedef
Superclass::JointPDFDerivativesSizeType | JointPDFDerivativesSizeType |
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typedef
Superclass::JointPDFDerivativesType | JointPDFDerivativesType |
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typedef
Superclass::JointPDFIndexType | JointPDFIndexType |
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typedef
Superclass::JointPDFRegionType | JointPDFRegionType |
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typedef
Superclass::JointPDFSizeType | JointPDFSizeType |
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| typedef Superclass::JointPDFType | JointPDFType |
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typedef
Superclass::KernelFunctionType | KernelFunctionType |
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| typedef Superclass::MarginalPDFType | MarginalPDFType |
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typedef
Superclass::MovingImageContinuousIndexType | MovingImageContinuousIndexType |
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typedef
Superclass::MovingImageDerivativeType | MovingImageDerivativeType |
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typedef
Superclass::MovingImageIndexType | MovingImageIndexType |
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typedef
Superclass::MovingImagePointType | MovingImagePointType |
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typedef
Superclass::NonZeroJacobianIndicesType | NonZeroJacobianIndicesType |
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typedef
Superclass::ParzenValueContainerType | ParzenValueContainerType |
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| typedef Superclass::PDFValueType | PDFValueType |
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typedef
Superclass::BSplineInterpolatorType | BSplineInterpolatorType |
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typedef
Superclass::CentralDifferenceGradientFilterType | CentralDifferenceGradientFilterType |
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typedef
Superclass::FixedImageIndexType | FixedImageIndexType |
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typedef
Superclass::FixedImageIndexValueType | FixedImageIndexValueType |
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typedef
Superclass::FixedImagePointType | FixedImagePointType |
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typedef
IncrementalMarginalPDFType::IndexType | IncrementalMarginalPDFIndexType |
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typedef
IncrementalMarginalPDFType::RegionType | IncrementalMarginalPDFRegionType |
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typedef
IncrementalMarginalPDFType::SizeType | IncrementalMarginalPDFSizeType |
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| typedef Image< PDFValueType, 2 > | IncrementalMarginalPDFType |
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typedef
JointPDFDerivativesType::IndexType | JointPDFDerivativesIndexType |
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typedef
JointPDFDerivativesType::RegionType | JointPDFDerivativesRegionType |
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typedef
JointPDFDerivativesType::SizeType | JointPDFDerivativesSizeType |
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| typedef Image< PDFValueType, 3 > | JointPDFDerivativesType |
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| typedef JointPDFType::IndexType | JointPDFIndexType |
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| typedef JointPDFType::RegionType | JointPDFRegionType |
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| typedef JointPDFType::SizeType | JointPDFSizeType |
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| typedef Image< PDFValueType, 2 > | JointPDFType |
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| typedef KernelFunction | KernelFunctionType |
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| typedef Array< PDFValueType > | MarginalPDFType |
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typedef
Superclass::MovingImageContinuousIndexType | MovingImageContinuousIndexType |
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typedef
Superclass::MovingImageDerivativeType | MovingImageDerivativeType |
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typedef
Superclass::MovingImageIndexType | MovingImageIndexType |
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typedef
Superclass::MovingImagePointType | MovingImagePointType |
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typedef
Superclass::NonZeroJacobianIndicesType | NonZeroJacobianIndicesType |
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typedef
FixedImageType::OffsetValueType | OffsetValueType |
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| typedef Array< double > | ParzenValueContainerType |
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| typedef float | PDFValueType |
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typedef
BSplineInterpolateImageFunction
< MovingImageType,
CoordinateRepresentationType,
float > | BSplineInterpolatorFloatType |
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typedef
BSplineInterpolateImageFunction
< MovingImageType,
CoordinateRepresentationType,
double > | BSplineInterpolatorType |
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typedef GradientImageFilter
< MovingImageType, RealType,
RealType > | CentralDifferenceGradientFilterType |
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| typedef FixedImageType::IndexType | FixedImageIndexType |
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typedef
FixedImageIndexType::IndexValueType | FixedImageIndexValueType |
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typedef
TransformType::InputPointType | FixedImagePointType |
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typedef
InterpolatorType::ContinuousIndexType | MovingImageContinuousIndexType |
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typedef
BSplineInterpolatorType::CovariantVectorType | MovingImageDerivativeType |
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| typedef MovingImageType::IndexType | MovingImageIndexType |
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typedef
TransformType::OutputPointType | MovingImagePointType |
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typedef
AdvancedTransformType::NonZeroJacobianIndicesType | NonZeroJacobianIndicesType |
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typedef
ReducedDimensionBSplineInterpolateImageFunction
< MovingImageType,
CoordinateRepresentationType,
double > | ReducedBSplineInterpolatorType |
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typedef itk::ImageGridSampler
< FixedImageType > | ExactMetricImageSamplerType |
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typedef
ExactMetricImageSamplerType::SampleGridSpacingType | ExactMetricSampleGridSpacingType |
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| typedef ITKBaseType::ParametersType | ParametersType |
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| double | m_Alpha |
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| KernelFunctionType::Pointer | m_DerivativeMovingKernel |
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| double | m_FixedImageBinSize |
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| MarginalPDFType | m_FixedImageMarginalPDF |
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| double | m_FixedImageNormalizedMin |
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| IncrementalMarginalPDFType::Pointer | m_FixedIncrementalMarginalPDFLeft |
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| IncrementalMarginalPDFType::Pointer | m_FixedIncrementalMarginalPDFRight |
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| KernelFunctionType::Pointer | m_FixedKernel |
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| double | m_FixedParzenTermToIndexOffset |
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| JointPDFDerivativesType::Pointer | m_IncrementalJointPDFLeft |
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| JointPDFDerivativesType::Pointer | m_IncrementalJointPDFRight |
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| JointPDFType::Pointer | m_JointPDF |
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| JointPDFDerivativesType::Pointer | m_JointPDFDerivatives |
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| JointPDFRegionType | m_JointPDFWindow |
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| double | m_MovingImageBinSize |
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| MarginalPDFType | m_MovingImageMarginalPDF |
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| double | m_MovingImageNormalizedMin |
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| IncrementalMarginalPDFType::Pointer | m_MovingIncrementalMarginalPDFLeft |
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| IncrementalMarginalPDFType::Pointer | m_MovingIncrementalMarginalPDFRight |
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| KernelFunctionType::Pointer | m_MovingKernel |
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| double | m_MovingParzenTermToIndexOffset |
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| DerivativeType | m_PerturbedAlphaLeft |
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| DerivativeType | m_PerturbedAlphaRight |
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| AdvancedTransformType::Pointer | m_AdvancedTransform |
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| BSplineInterpolatorType::Pointer | m_BSplineInterpolator |
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| BSplineInterpolatorFloatType::Pointer | m_BSplineInterpolatorFloat |
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| CentralDifferenceGradientFilterType::Pointer | m_CentralDifferenceGradientFilter |
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| FixedImageLimiterType::Pointer | m_FixedImageLimiter |
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| FixedImageLimiterOutputType | m_FixedImageMaxLimit |
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| FixedImageLimiterOutputType | m_FixedImageMinLimit |
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| FixedImagePixelType | m_FixedImageTrueMax |
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| FixedImagePixelType | m_FixedImageTrueMin |
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| ImageSamplerPointer | m_ImageSampler |
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| bool | m_InterpolatorIsBSpline |
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| bool | m_InterpolatorIsBSplineFloat |
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| bool | m_InterpolatorIsReducedBSpline |
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| MovingImageLimiterType::Pointer | m_MovingImageLimiter |
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| MovingImageLimiterOutputType | m_MovingImageMaxLimit |
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| MovingImageLimiterOutputType | m_MovingImageMinLimit |
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| MovingImagePixelType | m_MovingImageTrueMax |
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| MovingImagePixelType | m_MovingImageTrueMin |
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| ReducedBSplineInterpolatorType::Pointer | m_ReducedBSplineInterpolator |
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| bool | m_TransformIsAdvanced |
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| MeasureType | m_CurrentExactMetricValue |
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| ExactMetricSampleGridSpacingType | m_ExactMetricSampleGridSpacing |
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| ExactMetricImageSamplerType::Pointer | m_ExactMetricSampler |
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| bool | m_ShowExactMetricValue |
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| ConfigurationPointer | m_Configuration |
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| ElastixPointer | m_Elastix |
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| RegistrationPointer | m_Registration |
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template<class TElastix>
class elastix::NormalizedMutualInformationMetric< TElastix >
A metric based on the itk::ParzenWindowNormalizedMutualInformationImageToImageMetric.
The parameters used in this class are:
- Parameters:
Metric: Select this metric as follows:
(Metric "NormalizedMutualInformation")
NumberOfHistogramBins: The size of the histogram. Must be given for each resolution, or for all resolutions at once.
example: (NumberOfHistogramBins 32 32 64)
The default is 32 for each resolution.
NumberOfFixedHistogramBins: The size of the histogram in the fixed dimension. Can be given for each resolution, or for all resolutions at once. If not given, NumberOfHistograms is used.
example: (NumberOfFixedHistogramBins 32 32 64)
The default is the value of NumberOfHistograms.
NumberOfMovingHistogramBins: The size of the histogram in the fixed dimension. Can be given for each resolution, or for all resolutions at once. If not given, NumberOfHistograms is used.
example: (NumberOfMovingHistogramBins 32 32 64)
The default is the value of NumberOfHistograms.
FixedKernelBSplineOrder: The B-spline order of the Parzen window, used to estimate the joint histogram. Can be given for each resolution, or for all resolutions at once.
example: (FixedKernelBSplineOrder 0 1 1)
The default value is 0.
MovingKernelBSplineOrder: The B-spline order of the Parzen window, used to estimate the joint histogram. Can be given for each resolution, or for all resolutions at once.
example: (MovingKernelBSplineOrder 3 3 3)
The default value is 3.
FixedLimitRangeRatio: The relative extension of the intensity range of the fixed image.
If your image has gray values from 0 to 1000 and the FixedLimitRangeRatio is 0.001, the joint histogram will expect fixed image gray values from -0.001 to 1000.001. This may be useful if you use high order B-spline interpolator for the fixed image.
example: (FixedLimitRangeRatio 0.001 0.01 0.01)
The default value is 0.01. Can be given for each resolution, or for all resolutions at once.
MovingLimitRangeRatio: The relative extension of the intensity range of the moving image.
If your image has gray values from 0 to 1000 and the MovingLimitRangeRatio is 0.001, the joint histogram will expect moving image gray values from -0.001 to 1000.001. This may be useful if you use high order B-spline interpolator for the moving image.
example: (MovingLimitRangeRatio 0.001 0.01 0.01)
The default value is 0.01. Can be given for each resolution, or for all resolutions at once.
- See Also
- ParzenWindowNormalizedMutualInformationImageToImageMetric
Definition at line 73 of file elxNormalizedMutualInformationMetric.h.
Static Public Member Functions inherited from itk::ParzenWindowNormalizedMutualInformationImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
1.8.5