java.lang.Object
- java.io.OutputStream
- - htsjdk.samtools.cram.io.DefaultBitOutputStream

All Implemented Interfaces:: BitOutputStream, Closeable, Flushable, AutoCloseable

public class DefaultBitOutputStream
extends OutputStream
implements BitOutputStream

Constructor Summary

Constructors
Constructor Description

DefaultBitOutputStream(OutputStream delegate)

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`close()`
`void`	`flush()`
`String`	`toString()`
`void`	`write(boolean bit)`	Write a single bit specified in the boolean argument.
`void`	`write(boolean bit, long repeat)`	Write a single bit specified in the boolean argument repeatedly.
`void`	`write(byte b)`
`void`	`write(byte[] b)`
`void`	`write(byte[] b, int off, int length)`
`void`	`write(byte bitContainer, int nofBits)`	Write specified number of bits supplied in the byte value.
`void`	`write(int value)`
`void`	`write(int bitContainer, int nofBits)`	Write specified number of bits supplied in the integer value.
`void`	`write(long bitContainer, int nofBits)`	Write specified number of bits supplied in the long value.

Methods inherited from class java.io.OutputStream
nullOutputStream

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

- Constructor Detail
  - DefaultBitOutputStream
```
public DefaultBitOutputStream(OutputStream delegate)
```
- Method Detail
  - write
```
public void write(byte b)
```
  - write
```
public void write(int value)
```
    Specified by:
    
    write in class OutputStream
  - toString
```
public String toString()
```
    Overrides:
    
    toString in class Object
  - write
```
public void write(long bitContainer,
                  int nofBits)
```
    Description copied from interface: BitOutputStream
    
    Write specified number of bits supplied in the long value. The method is naturally limited to 64 bits max.
    
    Specified by:
    
    write in interface BitOutputStream
    
    Parameters:
    
    bitContainer - an integer containing the bits to be written out
    
    nofBits - the number of bits to written out, minimum 0, maximum 64.
  - write
```
public void write(int bitContainer,
                  int nofBits)
```
    Description copied from interface: BitOutputStream
    
    Write specified number of bits supplied in the integer value. The method is naturally limited to 32 bits max.
    
    Specified by:
    
    write in interface BitOutputStream
    
    Parameters:
    
    bitContainer - an integer containing the bits to be written out
    
    nofBits - the number of bits to written out, minimum 0, maximum 32.
  - write
```
public void write(byte bitContainer,
                  int nofBits)
```
    Description copied from interface: BitOutputStream
    
    Write specified number of bits supplied in the byte value. The method is naturally limited to 8 bits max.
    
    Specified by:
    
    write in interface BitOutputStream
    
    Parameters:
    
    bitContainer - an integer containing the bits to be written out
    
    nofBits - the number of bits to written out, minimum 0, maximum 8.
  - write
```
public void write(boolean bit)
```
    Description copied from interface: BitOutputStream
    
    Write a single bit specified in the boolean argument.
    
    Specified by:
    
    write in interface BitOutputStream
    
    Parameters:
    
    bit - emit 1 if true, 0 otherwise.
  - write
```
public void write(boolean bit,
                  long repeat)
```
    Description copied from interface: BitOutputStream
    
    Write a single bit specified in the boolean argument repeatedly.
    
    Specified by:
    
    write in interface BitOutputStream
    
    Parameters:
    
    bit - emit 1 if true, 0 otherwise.
    
    repeat - the number of bits to emit.
  - close
```
public void close()
```
    Specified by:
    
    close in interface AutoCloseable
    
    Specified by:
    
    close in interface Closeable
    
    Overrides:
    
    close in class OutputStream
  - flush
```
public void flush()
```
    Specified by:
    
    flush in interface Flushable
    
    Overrides:
    
    flush in class OutputStream
  - write
```
public void write(byte[] b)
```
    Overrides:
    
    write in class OutputStream
  - write
```
public void write(byte[] b,
                  int off,
                  int length)
```
    Overrides:
    
    write in class OutputStream

Class DefaultBitOutputStream

Constructor Summary

Method Summary

Methods inherited from class java.io.OutputStream

Methods inherited from class java.lang.Object

Constructor Detail

DefaultBitOutputStream

Method Detail

write

write

toString

write

write

write

write

write

close

flush

write

write