TerminatorlessBlockCompressedOutputStream (htsjdk 2.24.1 API)

java.lang.Object
- java.io.OutputStream
- - htsjdk.samtools.util.BlockCompressedOutputStream
  - - htsjdk.samtools.util.TerminatorlessBlockCompressedOutputStream

All Implemented Interfaces:

LocationAware, Closeable, Flushable, AutoCloseable
```
public class TerminatorlessBlockCompressedOutputStream
extends BlockCompressedOutputStream
```
An extension of BlockCompressedOutputStream that doesn't write an empty BGZF block at the end of the stream.

- Constructor Summary
  
  Constructors
  Constructor Description
  
  TerminatorlessBlockCompressedOutputStream(OutputStream os)
- Method Summary
  
  All Methods Instance Methods Concrete Methods
  Modifier and Type Method Description
  
  void close()
  close() must be called in order to flush any remaining buffered bytes.
  - Methods inherited from class htsjdk.samtools.util.BlockCompressedOutputStream
    addIndexer, close, flush, getDefaultCompressionLevel, getDefaultDeflaterFactory, getFilePointer, getPosition, maybeBgzfWrapOutputStream, setDefaultCompressionLevel, setDefaultDeflaterFactory, write, write, write
  - Methods inherited from class java.io.OutputStream
    nullOutputStream
  - Methods inherited from class java.lang.Object
    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - TerminatorlessBlockCompressedOutputStream
```
public TerminatorlessBlockCompressedOutputStream(OutputStream os)
```
- Method Detail
  - close
```
public void close()
           throws IOException
```
    Description copied from class: BlockCompressedOutputStream
    
    close() must be called in order to flush any remaining buffered bytes. An unclosed file will likely be defective.
    
    Specified by:
    
    close in interface AutoCloseable
    
    Specified by:
    
    close in interface Closeable
    
    Overrides:
    
    close in class BlockCompressedOutputStream
    
    Throws:
    
    IOException