ByteArrayStopEncoding (htsjdk 2.8.1 API)

java.lang.Object
- htsjdk.samtools.cram.encoding.ByteArrayStopEncoding

All Implemented Interfaces:: Encoding<byte[]>

public class ByteArrayStopEncoding
extends Object
implements Encoding<byte[]>

Nested Class Summary

Nested Classes
Modifier and Type Class and Description

static class ByteArrayStopEncoding.ByteArrayStopCodec

Nested Classes
Modifier and Type	Class and Description
`static class`	`ByteArrayStopEncoding.ByteArrayStopCodec`

Constructor Summary

Constructors
Constructor and Description

ByteArrayStopEncoding()

Constructors
Constructor and Description
`ByteArrayStopEncoding()`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`BitCodec<byte[]>`	`buildCodec(Map<Integer,InputStream> inputMap, Map<Integer,ExposedByteArrayOutputStream> outputMap)`
`void`	`fromByteArray(byte[] data)`
`EncodingID`	`id()`
`byte[]`	`toByteArray()`
`static EncodingParams`	`toParam(byte stopByte, int externalId)`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- ByteArrayStopEncoding
```
public ByteArrayStopEncoding()
```

Method Detail

id
```
public EncodingID id()
```
Specified by:

id in interface Encoding<byte[]>

toParam

public static EncodingParams toParam(byte stopByte,
                                     int externalId)

toByteArray
```
public byte[] toByteArray()
```
Specified by:

toByteArray in interface Encoding<byte[]>

fromByteArray
```
public void fromByteArray(byte[] data)
```
Specified by:

fromByteArray in interface Encoding<byte[]>

buildCodec

public BitCodec<byte[]> buildCodec(Map<Integer,InputStream> inputMap,
                                   Map<Integer,ExposedByteArrayOutputStream> outputMap)

Specified by:: buildCodec in interface Encoding<byte[]>

Class ByteArrayStopEncoding

Nested Class Summary

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

ByteArrayStopEncoding

Method Detail

id

toParam

toByteArray

fromByteArray

buildCodec