HuffmanByteEncoding (htsjdk 2.8.1 API)

java.lang.Object
- htsjdk.samtools.cram.encoding.huffman.codec.HuffmanByteEncoding

All Implemented Interfaces:: Encoding<Byte>

public class HuffmanByteEncoding
extends Object
implements Encoding<Byte>

Constructor Summary

Constructors
Constructor and Description

HuffmanByteEncoding()

Constructors
Constructor and Description
`HuffmanByteEncoding()`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`BitCodec<Byte>`	`buildCodec(Map<Integer,InputStream> inputMap, Map<Integer,ExposedByteArrayOutputStream> outputMap)`
`void`	`fromByteArray(byte[] data)`
`EncodingID`	`id()`
`byte[]`	`toByteArray()`
`static EncodingParams`	`toParam(byte[] bfValues, int[] bfBitLens)`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- HuffmanByteEncoding
```
public HuffmanByteEncoding()
```

Method Detail

id
```
public EncodingID id()
```
Specified by:

id in interface Encoding<Byte>

toByteArray
```
public byte[] toByteArray()
```
Specified by:

toByteArray in interface Encoding<Byte>

fromByteArray
```
public void fromByteArray(byte[] data)
```
Specified by:

fromByteArray in interface Encoding<Byte>

buildCodec

public BitCodec<Byte> buildCodec(Map<Integer,InputStream> inputMap,
                                 Map<Integer,ExposedByteArrayOutputStream> outputMap)

Specified by:: buildCodec in interface Encoding<Byte>

toParam

public static EncodingParams toParam(byte[] bfValues,
                                     int[] bfBitLens)

Class HuffmanByteEncoding

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

HuffmanByteEncoding

Method Detail

id

toByteArray

fromByteArray

buildCodec

toParam