Constructor Detail

• CramArray

  public CramArray()

Method Detail

• array

  public static int[] array(InputStream inputStream)
                     throws IOException

  Read CRAM int array from a InputStream.

  Parameters:

  inputStream - the inputs stream to read from

  Returns:

  array of integers from the input stream

  Throws:

  IOException - as per java IO contract

• write

  public static int write(int[] array,
                          OutputStream outputStream)
                   throws IOException

  Write CRAM int array to a OutputStream.

  Parameters:

  array - the array to be written

  outputStream - the output stream to write to

  Returns:

  the number of bits written out

  Throws:

  IOException - as per java IO contract