Uses of Class
jebl.evolution.align.Align
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Packages that use Align Package Description jebl.evolution.align Provides classes and interfaces for pairwise alignment of two sequences. -
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Uses of Align in jebl.evolution.align
Subclasses of Align in jebl.evolution.align Modifier and Type Class Description classMaximalSegmentPairclassNeedlemanWunschclassNeedlemanWunschAffineclassNeedlemanWunschLinearSpaceclassNeedlemanWunschLinearSpaceAffineclassNonOverlapMultipleLocalAffinePerforms recursive local alignments.classOldNeedlemanWunschAffineclassOverlapAlignclassSmithWatermanclassSmithWatermanLinearSpaceclassSmithWatermanLinearSpaceAffineMethods in jebl.evolution.align with parameters of type Align Modifier and Type Method Description voidSequenceShuffler. shuffle(Align algorithm, java.lang.String sq1, java.lang.String sq2, int numShuffles)
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