Package jgromacs.ui

Class Application

java.lang.Object
jgromacs.ui.Application
Direct Known Subclasses:
TemplateApplication
public abstract class Application extends Object
Parent class of JGromacs applications. You can extend this class to write JGromacs applications. (See TemplateApplication.java !)

  • Field Details

    • XMLFileName

      protected String XMLFileName
      XML configuration file name

  • Constructor Details

    • Application

      public Application()
      Constructor

  • Method Details

    • run

      protected void run(String[] args)
      Don't override this method!

    • runCore

      protected abstract void runCore()
      You can override this method to include your own code. This is the entry point of your program.

    • isArgumentGiven

      protected boolean isArgumentGiven(String flag)
      Returns true if the attribute defined by the given flag was called by the user
      Parameters:
      flag - attribute flag

    • getArgumentValue

      protected String getArgumentValue(String flag)
      Returns the value defined by the given attribute flag
      Parameters:
      flag - attribute flag
      Returns:
      value

    • askIndexSetFromUser

      protected int askIndexSetFromUser(IndexSetList list, String question)
      Asks the user which index set is to be selected from the index set list
      Parameters:
      list - index set list to select from
      question - question to be asked
      Returns:
      list index of selected index set

    • askIndexSetFromUser

      protected int askIndexSetFromUser(IndexSetList list)
      Asks the user which index set is to be selected from the index set list
      Parameters:
      list - index set list to select from
      Returns:
      list index of selected index set

    • canRunWithoutArgument

      protected void canRunWithoutArgument(boolean can)
      Sets if the application can run without argument
      Parameters:
      can - true if the application runs without argument

    • setWritingToLogFile

      protected void setWritingToLogFile(boolean write)
      Sets if the application writes log file
      Parameters:
      write - true if the application writes log file

    • setLogFileName

      protected void setLogFileName(String filename)
      Sets the name of log file
      Parameters:
      filename - name of log file

    • writeToLogFile

      protected void writeToLogFile(String text)
      Sets if the application writes log file
      Parameters:
      write - true if the application writes log file

    • getLogFileName

      protected String getLogFileName()
      Returns the name of log file
      Returns:
      name of log file