Package org.openscience.jmol.app.jmolpanel

Class JmolPanel

    • Field Detail

      • addPreferencesDialog

        private static final boolean addPreferencesDialog

      • addMacrosMenu

        private static final boolean addMacrosMenu

      • allowRecentFiles

        private static final boolean allowRecentFiles

      • addAtomChooser

        private static final boolean addAtomChooser

      • allowPreferences

        private static final boolean allowPreferences

      • allowGaussian

        private static final boolean allowGaussian

      • startupWidth

        protected int startupWidth

      • startupHeight

        protected int startupHeight

      • appletContext

        protected java.lang.String appletContext

      • pcs

        public java.beans.PropertyChangeSupport pcs

      • frame

        public javax.swing.JFrame frame

      • consoleframe

        protected javax.swing.JFrame consoleframe

      • qualityJPG

        protected int qualityJPG

      • qualityPNG

        protected int qualityPNG

      • imageType

        protected java.lang.String imageType

      • guimap

        public GuiMap guimap

      • commands

        protected java.util.Map<java.lang.String,​javax.swing.Action> commands

      • menuItems

        protected java.util.Map<java.lang.String,​javax.swing.JMenuItem> menuItems

      • toolbar

        protected javax.swing.JToolBar toolbar

      • vwrOptions

        protected java.util.Map<java.lang.String,​java.lang.Object> vwrOptions

      • windowName

        protected java.lang.String windowName

      • isPlugin

        protected boolean isPlugin

      • menubar

        private javax.swing.JMenuBar menubar

      • numWindows

        protected static int numWindows

      • kioskFrame

        protected static KioskFrame kioskFrame

      • bannerFrame

        protected static BannerFrame bannerFrame

      • allowJavaConsole

        protected static boolean allowJavaConsole

      • EDITOR_WINDOW_NAME

        protected static final java.lang.String EDITOR_WINDOW_NAME
        See Also:
        Constant Field Values

      • SCRIPT_WINDOW_NAME

        protected static final java.lang.String SCRIPT_WINDOW_NAME
        See Also:
        Constant Field Values

      • FILE_OPEN_WINDOW_NAME

        protected static final java.lang.String FILE_OPEN_WINDOW_NAME
        See Also:
        Constant Field Values

      • WEB_MAKER_WINDOW_NAME

        protected static final java.lang.String WEB_MAKER_WINDOW_NAME
        See Also:
        Constant Field Values

      • SURFACETOOL_WINDOW_NAME

        protected static final java.lang.String SURFACETOOL_WINDOW_NAME
        See Also:
        Constant Field Values

      • screenSize

        protected static final java.awt.Dimension screenSize

      • exportActionProperty

        protected static final java.lang.String exportActionProperty
        See Also:
        Constant Field Values

      • printActionProperty

        protected static final java.lang.String printActionProperty
        See Also:
        Constant Field Values

      • recentFilesAction

        protected static final java.lang.String recentFilesAction
        See Also:
        Constant Field Values

      • povrayActionProperty

        protected static final java.lang.String povrayActionProperty
        See Also:
        Constant Field Values

      • writeActionProperty

        protected static final java.lang.String writeActionProperty
        See Also:
        Constant Field Values

      • toWebActionProperty

        protected static final java.lang.String toWebActionProperty
        See Also:
        Constant Field Values

      • atomsetchooserAction

        protected static final java.lang.String atomsetchooserAction
        See Also:
        Constant Field Values

      • copyImageActionProperty

        protected static final java.lang.String copyImageActionProperty
        See Also:
        Constant Field Values

      • copyScriptActionProperty

        protected static final java.lang.String copyScriptActionProperty
        See Also:
        Constant Field Values

      • surfaceToolActionProperty

        protected static final java.lang.String surfaceToolActionProperty
        See Also:
        Constant Field Values

      • pasteClipboardActionProperty

        protected static final java.lang.String pasteClipboardActionProperty
        See Also:
        Constant Field Values

      • plugins

        java.util.Map<java.lang.String,​JmolPlugin> plugins

      • pluginMenu

        javax.swing.JMenu pluginMenu

      • imageChoices

        static final java.lang.String[] imageChoices

      • imageExtensions

        static final java.lang.String[] imageExtensions

    • Constructor Detail

      • JmolPanel

        public JmolPanel​(JmolApp jmolApp,
                 Splash splash,
                 javax.swing.JFrame frame,
                 JmolPanel parent,
                 int startupWidth,
                 int startupHeight,
                 java.util.Map<java.lang.String,​java.lang.Object> vwrOptions,
                 java.awt.Point loc)

    • Method Detail

      • getFrameActions

        protected java.util.List<javax.swing.Action> getFrameActions()
        Returns:
        A list of Actions that is understood by the upper level application

      • getStringX

        protected java.lang.String getStringX​(java.lang.String cmd)

      • getIconX

        protected javax.swing.ImageIcon getIconX​(java.lang.String img)

      • getWindowName

        protected java.lang.String getWindowName()

      • createGuiMap

        protected GuiMap createGuiMap()

      • createStatusBar

        protected StatusBar createStatusBar()

      • createToolBar

        protected javax.swing.JToolBar createToolBar()
        Create the toolbar. By default this reads the resource file for the definition of the toolbars.
        Returns:
        The toolbar

      • newToolbar

        protected javax.swing.JToolBar newToolbar​(java.lang.String[] keys)

      • createDisplayAndAddStatusListener

        protected void createDisplayAndAddStatusListener()

      • setupModelAdapterAndViewer

        protected void setupModelAdapterAndViewer()

      • getDialogs

        protected void getDialogs()

      • getMeasurementTable

        protected void getMeasurementTable()

      • setCommandHooks

        protected void setCommandHooks()

      • setupDisplay

        protected void setupDisplay()

      • setFrameLocation

        protected void setFrameLocation​(java.awt.Point loc,
                                JmolPanel parent)

      • setIntoFrame

        protected void setIntoFrame()

      • setupConsole

        protected void setupConsole()

      • setupDnD

        protected void setupDnD()

      • setAtomChooser

        protected void setAtomChooser()

      • launchMainFrame

        protected void launchMainFrame()

      • getJavaConsole

        @Deprecated
protected static void getJavaConsole​(Jmol jmol)
        Deprecated.

      • getJavaConsole

        public void getJavaConsole()

      • report

        protected void report​(java.lang.String str)

      • say

        protected void say​(java.lang.String message)

      • doClose

        protected boolean doClose​(boolean saveSize)

      • dispose

        void dispose​(javax.swing.JFrame f,
             boolean saveSize)

      • saveWindowSizes

        protected void saveWindowSizes()

      • createMenuItem

        public javax.swing.JMenuItem createMenuItem​(java.lang.String cmd)
        This is the hook through which all menu items are created. It registers the result with the menuitem hashtable so that it can be fetched with getMenuItem().
        Parameters:
        cmd -
        Returns:
        Menu item created
        See Also:
        getMenuItem(java.lang.String)

      • getMenuItem

        protected javax.swing.JMenuItem getMenuItem​(java.lang.String cmd)
        Fetch the menu item that was created for the given command.
        Parameters:
        cmd - Name of the action.
        Returns:
        item created for the given command or null if one wasn't created.

      • getAction

        protected javax.swing.Action getAction​(java.lang.String cmd)
        Fetch the action that was created for the given command.
        Parameters:
        cmd - Name of the action.
        Returns:
        The action

      • createToolbarButton

        protected javax.swing.AbstractButton createToolbarButton​(java.lang.String key)
        Create a button to go inside of the toolbar. By default this will load an image resource. The image filename is relative to the classpath (including the '.' directory if its a part of the classpath), and may either be in a JAR file or a separate file.
        Parameters:
        key - The key in the resource file to serve as the basis of lookups.
        Returns:
        Button

      • createMenubar

        protected javax.swing.JMenuBar createMenubar()
        Create the menubar for the app. By default this pulls the definition of the menu from the associated resource file.
        Returns:
        Menubar

      • addPluginMenu

        protected void addPluginMenu​(javax.swing.JMenuBar mb)

      • addMacrosMenu

        protected void addMacrosMenu​(javax.swing.JMenuBar menuBar)

      • addNormalMenuBar

        protected void addNormalMenuBar​(javax.swing.JMenuBar menuBar)

      • addHelpMenuBar

        protected void addHelpMenuBar​(javax.swing.JMenuBar menuBar)

      • createMenu

        public javax.swing.JMenu createMenu​(java.lang.String key)
        Create a menu for the app. By default this pulls the definition of the menu from the associated resource file.
        Parameters:
        key -
        Returns:
        Menu created

      • setMenuKeys

        protected java.lang.String setMenuKeys​(java.lang.String key,
                                       java.lang.String tokens)
        opportunity to adjust menus for a custom application
        Parameters:
        key -
        tokens -
        Returns:
        possibly changed token string

      • setMenuState

        protected void setMenuState()

      • doNew

        void doNew()

      • setMenuNBO

        void setMenuNBO​(javax.swing.JMenu item)
        Parameters:
        item -

      • startNBO

        void startNBO​(java.util.Map<java.lang.String,​java.lang.Object> jmolOptions)
        Parameters:
        jmolOptions - e.g. NOZAP;VIEWER unused

      • showPlugin

        void showPlugin​(java.lang.String name,
                java.lang.String path,
                java.util.Map<java.lang.String,​java.lang.Object> jmolOptions)

      • getAndRegisterPlugin

        protected JmolPlugin getAndRegisterPlugin​(java.lang.String name,
                                          java.lang.String path)

      • getInstanceWithParams

        public static java.lang.Object getInstanceWithParams​(java.lang.String name,
                                                     java.lang.Class<?>[] classes,
                                                     java.lang.Object... params)

      • print

        public void print()
        added print command, so that it can be used by RasmolScriptHandler

      • createImageStatus

        java.lang.String createImageStatus​(java.lang.String fileName,
                                   java.lang.String type,
                                   java.lang.Object text_or_bytes,
                                   int quality)
        Starting with Jmol 11.8.RC5, this is just informational if type == null and null is returned, then it means "Jmol, you handle it"
        Parameters:
        fileName -
        type -
        text_or_bytes -
        quality -
        Returns:
        null (you do it) or a message starting with OK or an error message

      • createWebExport

        void createWebExport()

      • createSurfaceTool

        void createSurfaceTool()

      • getUserDirectory

        public static java.io.File getUserDirectory()
        Returns a new File referenced by the property 'user.dir', or null if the property is not defined.
        Returns:
        a File to the user directory

      • openFile

        void openFile()

      • notifyFileOpen

        void notifyFileOpen​(java.lang.String fullPathName,
                    java.lang.String title)

      • resizeInnerPanel

        int[] resizeInnerPanel​(java.lang.String data)

      • resizeDisplay

        void resizeDisplay​(int width,
                   int height)

      • updateLabels

        void updateLabels()

      • sendNioSyncRequest

        void sendNioSyncRequest​(java.lang.Object data,
                        int port,
                        java.lang.String strInfo)

      • getJsonNioServer

        public static JsonNioServer getJsonNioServer()

      • syncScript

        public void syncScript​(java.lang.String script)

      • updateConsoleFont

        public void updateConsoleFont()

      • getPreference

        public java.lang.Object getPreference​(java.lang.String key)

      • getJmolProperty

        public static java.lang.String getJmolProperty​(java.lang.String key,
                                               java.lang.String defaultValue)

      • setPluginOption

        public static void setPluginOption​(java.lang.String pluginName,
                                   java.lang.String key,
                                   java.lang.String value)

      • getPluginOption

        public static java.lang.String getPluginOption​(java.lang.String pluginName,
                                               java.lang.String key,
                                               java.lang.String defaultValue)

      • addJmolProperties

        public static void addJmolProperties​(java.util.Properties props)

      • addJmolProperty

        public static void addJmolProperty​(java.lang.String key,
                                   java.lang.String value)

      • setStatus

        public void setStatus​(int pos,
                      java.lang.String msg)

      • addJmolWindowInfo

        @Deprecated
public static void addJmolWindowInfo​(java.lang.String name,
                                     java.awt.Component window,
                                     java.awt.Point border)
        Deprecated.
        Deprecated -- use addJmolWindowInnerInfo(name,window,Dimension inner)
        Parameters:
        name -
        window -
        border -

      • addJmolWindowInnerInfo

        public static void addJmolWindowInnerInfo​(java.lang.String name,
                                          java.awt.Component window,
                                          java.awt.Dimension inner)

      • processNioMessage

        public void processNioMessage​(byte[] packet)
                       throws java.lang.Exception
        Specified by:
        processNioMessage in interface JsonNioClient
        Throws:
        java.lang.Exception

      • isServer

        public boolean isServer()

      • nioSync

        public void nioSync​(java.util.Map<java.lang.String,​java.lang.Object> json,
                    JsonNioClient.TouchHandler handler)
             throws java.lang.Exception
        process touch or gesture commands driven by hardware. From MolecularPlayground.
        Parameters:
        json -
        handler -
        Throws:
        java.lang.Exception